BER launches Environmental System Science Program. Visit our new website under construction!

U.S. Department of Energy Office of Biological and Environmental Research

BER Research Highlights

Amazonian Forest Isoprene Emissions Vary with Terrain Elevations
Published: May 23, 2017
Posted: July 14, 2017

Research identifies a key factor governing the variability of isoprene emissions over the Amazonian forest.

The Science
Isoprene dominates global non-methane volatile organic compound (VOC) emissions and impacts tropospheric chemistry by influencing oxidants and aerosols (small atmospheric particles). This work, performed by a team including Department of Energy (DOE) scientists and DOE’s Atmospheric Radiation Measurement (ARM) Aerial Facility, identifies for the first time a key factor that governs isoprene emission rates within the Amazonian forest. Analyzing aircraft eddy covariance measurements during the GoAmazon 2014-5 field campaign, this research finds that isoprene emissions strongly correlate with terrain elevations, most likely due to varying plant species distributions at different elevations. These findings are consistent with similar correlations derived from analysis of satellite data.

The Impact
This work demonstrates the value of aircraft-derived measurements during the DOE-supported GoAmazon 2014-2015 field campaign and produces new insights on the isoprene emissions rate. The findings provide key clues for improving the representation of isoprene emissions within regional and global Earth system models (ESMs). The study demonstrates that current modeling estimates of isoprene emissions may be too low over the Amazonian forest, especially during the dry season.

Isoprene is the most abundant short-lived, reactive VOC emitted by terrestrial vegetation and therefore affects the oxidation capacity of the atmosphere, the formation of ozone, and production of secondary organic aerosols (SOAs). Accurate model representation of isoprene emission rates is critical to understand global impacts on regional chemistry and aerosols. The research analyzed eddy covariance measurements based on a proton-transfer reaction mass spectrometry (PTR-MS) instrument onboard the Gulfstream-1 research aircraft, and showed that levels of isoprene emissions strongly correlate with terrain elevation, a finding not presently represented in current ESMs. The study also analyzed results from the regional Weather Research and Forecasting coupled with Chemistry (WRF-Chem) model that uses simple mechanistic algorithms to estimate biogenic emissions fluxes based on the Model of Emissions of Gases and Aerosols from Nature (MEGAN). The research showed that the model underestimates isoprene emissions fluxes by ~35% compared to aircraft-derived estimates. Furthermore, these observations showed that biogenic isoprene emissions are much higher during the dry season compared to the wet season over the Amazonian forest. The study highlights the need for further measurements of leaf and canopy-scale isoprene emissions—at multiple sites along elevation gradients—to determine the cause and generality of these findings in other geographic locations.

Contacts (BER PM)
Ashley Williamson and Shaima Nasiri
Atmospheric System Research Program and

Sally McFarlane
Atmospheric Radiation Measurement Climate Research Facility

(PI Contact)
Jerome Fast
Pacific Northwest National Laboratory

Institutional support was provided by the Central Office of the Large-Scale Biosphere Atmosphere Experiment in Amazonia (LBA), the (Brazilian) National Institute of Amazonian Research and National Institute for Space Research, Amazonas State University, and Brazilian Space Agency. The work was conducted for the Brazilian National Council for Scientific and Technological Development. We acknowledge the Atmospheric Radiation Measurement (ARM) Climate Research Facility, a user facility of the U.S. Department of Energy, Office of Science, sponsored by the Office of Biological and Environmental Research (BER), and support from BER’s Atmospheric System Research (ASR) program. A.B.G. was partially supported by the National Aeronautics and Space Administration’s Atmospheric Composition Campaign Data Analysis and Modeling program.

Gu, D., et al. 2017. “Airborne Observations Reveal Elevational Gradient in Tropical Forest Isoprene Emissions,” Nature Communications 8(15541), DOI: 10.1038/ncomms15541. (Reference link)

Topic Areas:

  • Research Area: Earth and Environmental Systems Modeling
  • Research Area: Atmospheric System Research
  • Research Area: Terrestrial Ecosystem Science
  • Facility: DOE ARM User Facility

Division: SC-33.1 Earth and Environmental Sciences Division, BER


BER supports basic research and scientific user facilities to advance DOE missions in energy and environment. More about BER

Recent Highlights

Mar 23, 2021
Molecular Connections from Plants to Fungi to Ants
Lipids transfer energy and serve as an inter-kingdom communication tool in leaf-cutter ants&rsqu [more...]

Mar 19, 2021
Microbes Use Ancient Metabolism to Cycle Phosphorus
Microbial cycling of phosphorus through reduction-oxidation reactions is older and more widespre [more...]

Feb 22, 2021
Warming Soil Means Stronger Microbe Networks
Soil warming leads to more complex, larger, and more connected networks of microbes in those soi [more...]

Jan 27, 2021
Labeling the Thale Cress Metabolites
New data pipeline identifies metabolites following heavy isotope labeling.

Analysis [more...]

Aug 31, 2020
Novel Bacterial Clade Reveals Origin of Form I Rubisco

  • All plant biomass is sourced from the carbon-fixing enzyme Rub [more...]

List all highlights (possible long download time)