BER launches Environmental System Science Program. Visit our new website under construction!

U.S. Department of Energy Office of Biological and Environmental Research

BER Research Highlights

A One-Pot Recipe for Making Jet Fuel
Published: April 04, 2016
Posted: July 20, 2016

Researchers in a microbiology lab at the Joint BioEnergy Institute are working to streamline the biofuels production process. Image courtesy Lawrence Berkeley National Laboratory

Researchers use engineered bacteria to simplify biofuels production, potentially lowering cost.

The Science
Researchers isolated an Escherichia coli mutant that tolerates a liquid salt used to break apart plant biomass into sugary polymers. Because the salt solvent, known as ionic liquid (IL), interferes with the later stages of biofuels production, it has to be removed before proceeding, a process that requires time and money. The researchers genetically engineered the E. coli strain to excrete an IL-tolerant cellulase and used the resulting sugars to synthesize d-limonene, a jet fuel precursor.

The Impact
IL-tolerant bacteria enable a “one-pot” method for producing advanced biofuels from a slurry of pretreated plant material, helping to streamline the production process, which is critical to making biofuels a viable competitor with fossil fuels.

Biological production of chemicals and fuels using microbial transformation of sustainable carbon sources, such as pretreated and saccharified plant biomass, is a multistep process. Each of the steps—deconstruction of the cellulose, hemicellulose, and lignin that are bound together in the plant cell wall; addition of enzymes to release sugars; and conversion into the desired biofuel—is done in separate pots. Significant effort has gone into developing efficient solutions to these discrete steps, but few studies report the consolidation of the multistep workflow into a single pot reactor system. Researchers at the Department of Energy’s (DOE) Joint BioEnergy Institute (JBEI) demonstrate a one-pot biofuel production process that uses an IL (1-ethyl-3-methylimidazolium acetate) for pretreating switchgrass biomass. This IL is highly effective in deconstructing lignocellulose, but leaves behind a residue that is toxic to standard cellulase and the microbial production host. JBEI scientists established that an amino acid mutation in the gene rcdA leads to an E. coli strain that is highly tolerant to ILs. To develop a strain for a one-pot process, they engineered this IL-tolerant strain to express a d-limonene production pathway. The JBEI researchers also screened previously reported IL-tolerant cellulases to select one that would function with the range of E. coli cultivation conditions and expressed it in the IL-tolerant E. coli strain to secrete this IL- tolerant cellulase. The final strain was found to digest pretreated biomass and use the liberated sugars to produce the jet fuel candidate precursor d-limonene in a one-pot process.

Contacts (BER PM)
N. Kent Peters
Program Manager, Office of Biological and Environmental Research, 301-903-5549

(PI Contact)
Aindrila Mukhopadhyay
Joint BioEnergy Institute, Emeryville, CA, USA

This work was part of the Joint BioEnergy Institute supported by the U. S. Department of Energy, Office of Science, Office of Biological and Environmental Research through contract DE-AC02-05CH11231.

Frederix, M., et al. 2016. “Development of an E. coli strain for One-Pot Biofuel Production from Ionic Liquid Pretreated Cellulose and Switchgrass,” Green Chemistry, DOI: 10.1039/c6gc00642f. (Reference link)

Related Links
News release

Topic Areas:

  • Research Area: Genomic Analysis and Systems Biology
  • Research Area: Microbes and Communities
  • Research Area: Plant Systems and Feedstocks, Plant-Microbe Interactions
  • Research Area: Sustainable Biofuels and Bioproducts
  • Research Area: DOE Bioenergy Research Centers (BRC)
  • Research Area: Biosystems Design

Division: SC-33.2 Biological Systems Science Division, BER


BER supports basic research and scientific user facilities to advance DOE missions in energy and environment. More about BER

Recent Highlights

Mar 23, 2021
Molecular Connections from Plants to Fungi to Ants
Lipids transfer energy and serve as an inter-kingdom communication tool in leaf-cutter ants&rsqu [more...]

Mar 19, 2021
Microbes Use Ancient Metabolism to Cycle Phosphorus
Microbial cycling of phosphorus through reduction-oxidation reactions is older and more widespre [more...]

Feb 22, 2021
Warming Soil Means Stronger Microbe Networks
Soil warming leads to more complex, larger, and more connected networks of microbes in those soi [more...]

Jan 27, 2021
Labeling the Thale Cress Metabolites
New data pipeline identifies metabolites following heavy isotope labeling.

Analysis [more...]

Aug 31, 2020
Novel Bacterial Clade Reveals Origin of Form I Rubisco

  • All plant biomass is sourced from the carbon-fixing enzyme Rub [more...]

List all highlights (possible long download time)